1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00040p00132210

AMTR_s00040p00132210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.99

Description : Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SPY O-fucosyltransferase


Gene families : OG0004877 (Archaeplastida) Phylogenetic Tree(s): OG0004877_tree ,
OG_05_0004549 (LandPlants) Phylogenetic Tree(s): OG_05_0004549_tree ,
OG_06_0006064 (SeedPlants) Phylogenetic Tree(s): OG_06_0006064_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00132210
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Pp3c2_30810V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR001440 TPR_1 413 445
IPR001440 TPR_1 236 269
No external refs found!