GSVIVT01019476001

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000363 (LandPlants) Phylogenetic Tree(s): OG_05_0000363_tree ,
OG_06_0001693 (SeedPlants) Phylogenetic Tree(s): OG_06_0001693_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01019476001
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000718.2	No alias	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cpa\|evm.model.tig00000718.3	No alias	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cre03.g174050	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01015960001	No alias	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
GSVIVT01028722001	No alias	Solute transport.primary active transport.ABC...	0.06	Archaeplastida
LOC_Os01g25386.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
MA_10436190g0040	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.02	Archaeplastida
Smo267271	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo409191	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo99030	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc01g080640.3.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Solyc07g065320.4.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Solyc08g081890.4.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Solyc12g044810.3.1	No alias	ABC transporter C family member 8 OS=Arabidopsis...	0.02	Archaeplastida
Solyc12g044820.3.1	No alias	subfamily ABCC transporter	0.04	Archaeplastida
Zm00001e000347_P001	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Zm00001e038918_P002	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Zm00001e040598_P001	No alias	No annotation	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Neighborhood
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Neighborhood
MF	GO:0008066	glutamate receptor activity	IEP	Neighborhood
BP	GO:0009314	response to radiation	IEP	Neighborhood
BP	GO:0009416	response to light stimulus	IEP	Neighborhood
BP	GO:0009581	detection of external stimulus	IEP	Neighborhood
BP	GO:0009582	detection of abiotic stimulus	IEP	Neighborhood
BP	GO:0009583	detection of light stimulus	IEP	Neighborhood
BP	GO:0009584	detection of visible light	IEP	Neighborhood
BP	GO:0009605	response to external stimulus	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Neighborhood
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Neighborhood
BP	GO:0018298	protein-chromophore linkage	IEP	Neighborhood
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
MF	GO:0022835	transmitter-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
MF	GO:0030594	neurotransmitter receptor activity	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	365	499
IPR003439	ABC_transporter-like	973	1121
IPR011527	ABC1_TM_dom	639	886

External Links

No external refs found!

GSVIVT01019476001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation