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  5. GSVIVT01019492001

GSVIVT01019492001


Description : External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.SPA regulator component


Gene families : OG0000790 (Archaeplastida) Phylogenetic Tree(s): OG0000790_tree ,
OG_05_0001763 (LandPlants) Phylogenetic Tree(s): OG_05_0001763_tree ,
OG_06_0004834 (SeedPlants) Phylogenetic Tree(s): OG_06_0004834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019492001
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G53090 SPA4 SPA1-related 4 0.05 Archaeplastida
AT2G46340 SPA1 SPA (suppressor of phyA-105) protein family 0.05 Archaeplastida
AT3G15354 SPA3 SPA1-related 3 0.03 Archaeplastida
Gb_40887 No alias protein kinase (PEK). regulator component SPA of... 0.04 Archaeplastida
Solyc08g081990.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.04 Archaeplastida
Solyc10g011690.3.1 No alias protein kinase (PEK). regulator component SPA of... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 570 607
IPR001680 WD40_repeat 659 691
No external refs found!