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  5. AMTR_s00040p00141670

AMTR_s00040p00141670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.109

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,6-galactosyltransferase


Gene families : OG0002376 (Archaeplastida) Phylogenetic Tree(s): OG0002376_tree ,
OG_05_0001706 (LandPlants) Phylogenetic Tree(s): OG_05_0001706_tree ,
OG_06_0002054 (SeedPlants) Phylogenetic Tree(s): OG_06_0002054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00141670
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT1G08280 No alias Glycosyltransferase family 29 (sialyltransferase) family protein 0.06 Archaeplastida
Zm00001e007633_P001 No alias AGP beta-1,6-galactosyltransferase 0.03 Archaeplastida
Zm00001e028697_P001 No alias AGP beta-1,6-galactosyltransferase 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008373 sialyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001675 Glyco_trans_29 126 368
No external refs found!