Description : Cell cycle.interphase.DNA replication.elongation.DNA polymerase alpha complex.POLA4 primase component
Gene families : OG0006271 (Archaeplastida) Phylogenetic Tree(s): OG0006271_tree ,
OG_05_0008282 (LandPlants) Phylogenetic Tree(s): OG_05_0008282_tree ,
OG_06_0008691 (SeedPlants) Phylogenetic Tree(s): OG_06_0008691_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019518001 | |
Cluster | HCCA: Cluster_53 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G41880 | POLA4, POLA3 | DNA primases;DNA primases | 0.11 | Archaeplastida | |
Cpa|evm.model.tig00000342.9 | No alias | Cell cycle.interphase.DNA replication.elongation.DNA... | 0.1 | Archaeplastida | |
Cre07.g312350 | No alias | Cell cycle.interphase.DNA replication.elongation.DNA... | 0.1 | Archaeplastida | |
Gb_36626 | No alias | primase component POLA4 of DNA polymerase alpha complex | 0.16 | Archaeplastida | |
LOC_Os05g29010.2 | No alias | primase component POLA4 of DNA polymerase alpha complex | 0.03 | Archaeplastida | |
MA_7952g0010 | No alias | No annotation | 0.13 | Archaeplastida | |
Mp1g25150.1 | No alias | primase component POLA4 of DNA polymerase alpha complex | 0.16 | Archaeplastida | |
Pp3c9_1070V3.1 | No alias | DNA primases;DNA primases | 0.05 | Archaeplastida | |
Solyc08g082200.3.1 | No alias | primase component POLA4 of DNA polymerase alpha complex | 0.22 | Archaeplastida | |
Zm00001e026781_P002 | No alias | primase component POLA4 of DNA polymerase alpha complex | 0.2 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003896 | DNA primase activity | IEA | Interproscan |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Neighborhood |
BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
CC | GO:0000808 | origin recognition complex | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002755 | DNA_primase_S | 132 | 367 |
No external refs found! |