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  5. GSVIVT01019592001

GSVIVT01019592001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0017493 (LandPlants) Phylogenetic Tree(s): OG_05_0017493_tree ,
OG_06_0017052 (SeedPlants) Phylogenetic Tree(s): OG_06_0017052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019592001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.03 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.06 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01008756001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.04 Archaeplastida
Gb_08038 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g30310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_122471g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_73524g0020 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.08 Archaeplastida
MA_77628g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c24_7770V3.1 No alias hypoxia-responsive family protein / zinc finger... 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g055140.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 145
No external refs found!