1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01019619001

GSVIVT01019619001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019619001
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00069p00049300 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 Archaeplastida
AT3G50410 OBP1 OBF binding protein 1 0.02 Archaeplastida
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.06 Archaeplastida
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_20130 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_28499 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os09g29960.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c17_3860V3.1 No alias OBF binding protein 4 0.03 Archaeplastida
Pp3c6_13360V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc04g070960.3.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc06g069760.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e004809_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 38 94
No external refs found!