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  5. GSVIVT01019667001

GSVIVT01019667001


Description : RNA biosynthesis.transcriptional activation.GRF-GIF transcriptional complex.GRF transcription factor component


Gene families : OG0000341 (Archaeplastida) Phylogenetic Tree(s): OG0000341_tree ,
OG_05_0000223 (LandPlants) Phylogenetic Tree(s): OG_05_0000223_tree ,
OG_06_0014990 (SeedPlants) Phylogenetic Tree(s): OG_06_0014990_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019667001
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00257830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 Archaeplastida
AMTR_s00024p00228870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 Archaeplastida
AMTR_s00040p00189460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 Archaeplastida
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.03 Archaeplastida
AT5G53660 AtGRF7, GRF7 growth-regulating factor 7 0.02 Archaeplastida
Gb_20443 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
Gb_26136 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
LOC_Os02g47280.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os02g53690.1 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
LOC_Os03g47140.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
LOC_Os04g48510.1 No alias component GRF of GRF-GIF transcriptional complex 0.02 Archaeplastida
LOC_Os11g35030.1 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
LOC_Os12g29980.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
MA_111469g0010 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
MA_18836g0010 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida
Pp3c12_3720V3.1 No alias growth-regulating factor 2 0.05 Archaeplastida
Pp3c17_1780V3.1 No alias growth-regulating factor 2 0.03 Archaeplastida
Solyc01g091540.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
Solyc03g082430.1.1 No alias component GRF of GRF-GIF transcriptional complex 0.09 Archaeplastida
Solyc04g077510.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g005430.3.1 No alias component GRF of GRF-GIF transcriptional complex 0.05 Archaeplastida
Solyc10g083510.2.1 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Solyc12g096070.2.1 No alias component GRF of GRF-GIF transcriptional complex 0.03 Archaeplastida
Zm00001e012104_P002 No alias component GRF of GRF-GIF transcriptional complex 0.06 Archaeplastida
Zm00001e036224_P001 No alias component GRF of GRF-GIF transcriptional complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR014977 WRC_dom 40 82
No external refs found!