Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP1 component
Gene families : OG0001913 (Archaeplastida) Phylogenetic Tree(s): OG0001913_tree ,
OG_05_0002230 (LandPlants) Phylogenetic Tree(s): OG_05_0002230_tree ,
OG_06_0002832 (SeedPlants) Phylogenetic Tree(s): OG_06_0002832_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01019679001 | |
Cluster | HCCA: Cluster_69 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00113490 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.17 | Archaeplastida | |
AMTR_s00100p00050800 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
AT1G01100 | No alias | 60S acidic ribosomal protein family | 0.16 | Archaeplastida | |
AT4G00810 | No alias | 60S acidic ribosomal protein family | 0.14 | Archaeplastida | |
AT5G47700 | No alias | 60S acidic ribosomal protein family | 0.11 | Archaeplastida | |
Cpa|evm.model.tig00000342.4 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | Archaeplastida | |
Cre17.g738300 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.31 | Archaeplastida | |
GSVIVT01027436001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | Archaeplastida | |
LOC_Os08g02340.1 | No alias | component RPP1 of LSU proteome component | 0.23 | Archaeplastida | |
MA_10430200g0010 | No alias | component RPP1 of LSU proteome component | 0.17 | Archaeplastida | |
MA_90134g0010 | No alias | component RPP1 of LSU proteome component | 0.19 | Archaeplastida | |
Mp3g02890.1 | No alias | component RPP1 of LSU proteome component | 0.05 | Archaeplastida | |
Mp6g11950.1 | No alias | component RPP1 of LSU proteome component | 0.04 | Archaeplastida | |
Pp3c17_22190V3.1 | No alias | 60S acidic ribosomal protein family | 0.29 | Archaeplastida | |
Pp3c1_36220V3.1 | No alias | 60S acidic ribosomal protein family | 0.36 | Archaeplastida | |
Pp3c20_2800V3.1 | No alias | 60S acidic ribosomal protein family | 0.21 | Archaeplastida | |
Pp3c23_18100V3.1 | No alias | 60S acidic ribosomal protein family | 0.24 | Archaeplastida | |
Pp3c8_22380V3.1 | No alias | 60S acidic ribosomal protein family | 0.23 | Archaeplastida | |
Smo133023 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | Archaeplastida | |
Solyc01g006160.3.1 | No alias | component RPP1 of LSU proteome component | 0.1 | Archaeplastida | |
Solyc01g016470.3.1 | No alias | component RPP1 of LSU proteome component | 0.25 | Archaeplastida | |
Solyc01g104370.4.1 | No alias | component RPP1 of LSU proteome component | 0.11 | Archaeplastida | |
Zm00001e021844_P001 | No alias | component RPP1 of LSU proteome component | 0.05 | Archaeplastida | |
Zm00001e029197_P001 | No alias | component RPP1 of LSU proteome component | 0.18 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
CC | GO:0005787 | signal peptidase complex | IEP | Neighborhood |
CC | GO:0005840 | ribosome | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006412 | translation | IEP | Neighborhood |
BP | GO:0006465 | signal peptide processing | IEP | Neighborhood |
BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0007021 | tubulin complex assembly | IEP | Neighborhood |
BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
BP | GO:0016485 | protein processing | IEP | Neighborhood |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0030008 | TRAPP complex | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Neighborhood |
MF | GO:0048487 | beta-tubulin binding | IEP | Neighborhood |
BP | GO:0051604 | protein maturation | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
CC | GO:1905368 | peptidase complex | IEP | Neighborhood |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |