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  5. GSVIVT01019689001

GSVIVT01019689001


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL11 component


Gene families : OG0006029 (Archaeplastida) Phylogenetic Tree(s): OG0006029_tree ,
OG_05_0005977 (LandPlants) Phylogenetic Tree(s): OG_05_0005977_tree ,
OG_06_0008850 (SeedPlants) Phylogenetic Tree(s): OG_06_0008850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019689001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272010 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT1G32990 PRPL11 plastid ribosomal protein l11 0.23 Archaeplastida
Cre10.g423650 No alias Protein biosynthesis.organelle translation... 0.14 Archaeplastida
Gb_12514 No alias component psRPL11 of large ribosomal subunit proteome 0.17 Archaeplastida
LOC_Os03g03020.1 No alias component psRPL11 of large ribosomal subunit proteome 0.19 Archaeplastida
Mp7g12110.1 No alias component psRPL11 of large ribosomal subunit proteome 0.17 Archaeplastida
Pp3c10_12450V3.1 No alias plastid ribosomal protein l11 0.13 Archaeplastida
Pp3c12_19370V3.1 No alias plastid ribosomal protein l11 0.13 Archaeplastida
Pp3c3_20370V3.1 No alias plastid ribosomal protein l11 0.08 Archaeplastida
Solyc08g083350.4.1 No alias component psRPL11 of large ribosomal subunit proteome 0.21 Archaeplastida
Zm00001e000163_P001 No alias component psRPL11 of large ribosomal subunit proteome 0.21 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 10 74
IPR020783 Ribosomal_L11_C 79 147
No external refs found!