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  5. GSVIVT01019722001

GSVIVT01019722001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0000568 (SeedPlants) Phylogenetic Tree(s): OG_06_0000568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019722001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.06 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
LOC_Os03g02240.1 No alias transcription factor (Trihelix) 0.05 Archaeplastida
LOC_Os04g45750.1 No alias transcription factor (Trihelix) 0.05 Archaeplastida
LOC_Os10g37240.4 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 Archaeplastida
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.02 Archaeplastida
Mp8g08100.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Pp3c21_18550V3.1 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Zm00001e000092_P003 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e004364_P002 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e007383_P001 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e012540_P001 No alias transcription factor (Trihelix) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!