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  5. GSVIVT01019750001

GSVIVT01019750001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0002624 (Archaeplastida) Phylogenetic Tree(s): OG0002624_tree ,
OG_05_0002177 (LandPlants) Phylogenetic Tree(s): OG_05_0002177_tree ,
OG_06_0001598 (SeedPlants) Phylogenetic Tree(s): OG_06_0001598_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019750001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT4G00480 myc1, ATMYC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
LOC_Os04g47040.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e033106_P004 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 14 197
IPR011598 bHLH_dom 344 390
No external refs found!