AMTR_s00040p00156520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.131

No description available


Gene families : OG0001948 (Archaeplastida) Phylogenetic Tree(s): OG0001948_tree ,
OG_05_0001269 (LandPlants) Phylogenetic Tree(s): OG_05_0001269_tree ,
OG_06_0000764 (SeedPlants) Phylogenetic Tree(s): OG_06_0000764_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00156520
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00157890 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G52790 No alias peptidoglycan-binding LysM domain-containing protein 0.07 Archaeplastida
AT5G62150 No alias peptidoglycan-binding LysM domain-containing protein 0.05 Archaeplastida
Gb_36040 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_39268 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g02685.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10325924g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_157865g0010 No alias Actin-1 OS=Oryza sativa subsp. indica... 0.03 Archaeplastida
MA_427792g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_451633g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g026370.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g083410.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e000131_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR018392 LysM_dom 54 95
No external refs found!