AMTR_s00040p00156520 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.131

No description available

Gene families : OG0001948 (Archaeplastida) Phylogenetic Tree(s): OG0001948_tree ,
OG_05_0001269 (LandPlants) Phylogenetic Tree(s): OG_05_0001269_tree ,
OG_06_0000764 (SeedPlants) Phylogenetic Tree(s): OG_06_0000764_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00040p00156520
Cluster	HCCA: Cluster_152

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00157890	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AT3G52790	No alias	peptidoglycan-binding LysM domain-containing protein	0.07	Archaeplastida
AT5G62150	No alias	peptidoglycan-binding LysM domain-containing protein	0.05	Archaeplastida
Gb_36040	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_39268	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os03g02685.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10325924g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_157865g0010	No alias	Actin-1 OS=Oryza sativa subsp. indica...	0.03	Archaeplastida
MA_427792g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_451633g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc03g026370.1.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc10g083410.1.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e000131_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018392	LysM_dom	54	95

External Links

No external refs found!