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  5. GSVIVT01019782001

GSVIVT01019782001


Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000920 (Archaeplastida) Phylogenetic Tree(s): OG0000920_tree ,
OG_05_0000667 (LandPlants) Phylogenetic Tree(s): OG_05_0000667_tree ,
OG_06_0004178 (SeedPlants) Phylogenetic Tree(s): OG_06_0004178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01019782001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.04 Archaeplastida
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01033709001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04458 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g01710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g21940.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g36060.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g39950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_180303g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9751268g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c17_13440V3.1 No alias No annotation 0.02 Archaeplastida
Solyc04g072630.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g080780.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004411_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e012583_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR019448 NT-C2 11 142
No external refs found!