GSVIVT01019889001

Description : Cell wall.cell wall proteins.expansins.alpha-type expansin

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0006420 (SeedPlants) Phylogenetic Tree(s): OG_06_0006420_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01019889001
Cluster	HCCA: Cluster_237

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00230920	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.03	Archaeplastida
AMTR_s00119p00058870	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
AT1G26770	ATEXPA10,...	expansin A10	0.05	Archaeplastida
GSVIVT01016525001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
GSVIVT01025509001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.04	Archaeplastida
Gb_20678	No alias	alpha-class expansin	0.05	Archaeplastida
LOC_Os01g14660.1	No alias	alpha-class expansin	0.03	Archaeplastida
MA_6644365g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Pp3c13_20360V3.1	No alias	expansin A9	0.02	Archaeplastida
Pp3c8_1320V3.1	No alias	expansin A4	0.03	Archaeplastida
Solyc03g115890.3.1	No alias	alpha-class expansin	0.06	Archaeplastida
Solyc08g007780.3.1	No alias	Putative expansin-A30 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009009	RlpA-like_DPBB	73	159
IPR007117	Expansin_CBD	171	248

External Links

No external refs found!