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  5. AMTR_s00040p00170390

AMTR_s00040p00170390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.148

No description available


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0000511 (SeedPlants) Phylogenetic Tree(s): OG_06_0000511_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00170390
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.03 Archaeplastida
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
GSVIVT01034762001 No alias No description available 0.03 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g73720.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10434352g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_558137g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7605738g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g11810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mpzg00310.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
Pp3c23_2610V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
Pp3c23_2628V3.1 No alias No annotation 0.02 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g066590.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 228 283
No external refs found!