GSVIVT01020011001


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020011001
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G72010 No alias TCP family transcription factor 0.03 Archaeplastida
AT3G45150 TCP16 TCP domain protein 16 0.04 Archaeplastida
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 Archaeplastida
Gb_34229 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os02g51280.1 No alias transcription factor (TCP) 0.07 Archaeplastida
LOC_Os04g44440.1 No alias transcription factor (TCP) 0.04 Archaeplastida
LOC_Os08g43160.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os11g07460.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os12g07480.1 No alias transcription factor (TCP) 0.06 Archaeplastida
MA_16752g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.03 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc04g009180.3.1 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Solyc05g007420.2.1 No alias transcription factor (TCP) 0.07 Archaeplastida
Solyc06g070900.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e015821_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e023897_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e028426_P001 No alias transcription factor (TCP). TCP20 circadian clock... 0.02 Archaeplastida
Zm00001e039492_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 47 197
No external refs found!