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  5. GSVIVT01020170001

GSVIVT01020170001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.ribonuclease H1


Gene families : OG0000456 (Archaeplastida) Phylogenetic Tree(s): OG0000456_tree ,
OG_05_0000774 (LandPlants) Phylogenetic Tree(s): OG_05_0000774_tree ,
OG_06_0001189 (SeedPlants) Phylogenetic Tree(s): OG_06_0001189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020170001
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00062060 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
AT1G24090 No alias RNase H family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
InterPro domains Description Start Stop
IPR011320 RNase_H1_N 151 173
IPR002156 RNaseH_domain 295 416
No external refs found!