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  5. AMTR_s00040p00175180

AMTR_s00040p00175180 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.166

Description : WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana


Gene families : OG0005242 (Archaeplastida) Phylogenetic Tree(s): OG0005242_tree ,
OG_05_0006400 (LandPlants) Phylogenetic Tree(s): OG_05_0006400_tree ,
OG_06_0007886 (SeedPlants) Phylogenetic Tree(s): OG_06_0007886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00175180

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009344001 No alias WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 391 426
IPR001680 WD40_repeat 38 72
IPR001680 WD40_repeat 101 132
IPR001680 WD40_repeat 309 339
IPR001680 WD40_repeat 184 219
No external refs found!