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  5. GSVIVT01020292001

GSVIVT01020292001


Description : Disease resistance protein SUMM2 OS=Arabidopsis thaliana


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020292001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00105720 evm_27.TU.AmTr_v1... Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00078p00177570 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00099p00016470 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.04 Archaeplastida
AT1G51480 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01014599001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01034252001 No alias Probable disease resistance protein At1g61300... 0.03 Archaeplastida
Gb_15875 No alias Putative disease resistance protein At4g10780... 0.02 Archaeplastida
MA_194625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!