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  5. GSVIVT01020353001

GSVIVT01020353001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020353001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT1G31320 LBD4 LOB domain-containing protein 4 0.03 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.04 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01025126001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032415001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os11g01550.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os12g01550.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_10434193g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 13 110
No external refs found!