GSVIVT01020394001

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0004181 (SeedPlants) Phylogenetic Tree(s): OG_06_0004181_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01020394001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00242720	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.09	Archaeplastida
AMTR_s00007p00063550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00010p00260100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00010p00266320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00092p00142980	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	Archaeplastida
AT1G32870	ANAC013, NAC13, ANAC13	NAC domain protein 13	0.05	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.05	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.02	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.02	Archaeplastida
GSVIVT01019702001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01020387001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01025515001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_35309	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g43560.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os07g12340.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os09g38000.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
LOC_Os11g03370.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_10426365g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g20920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.01	Archaeplastida
Pp3c27_7430V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.01	Archaeplastida
Pp3c4_11490V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Solyc04g009440.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc09g025310.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.1	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e010094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e024549_P002	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	18	146

External Links

No external refs found!

GSVIVT01020394001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation