AMTR_s00040p00185210 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.179

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00040p00185210
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00225530	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AMTR_s00056p00117010	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
AMTR_s00069p00192990	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
AMTR_s00122p00120860	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT1G66950	PDR11, ATPDR11	pleiotropic drug resistance 11	0.03	Archaeplastida
AT3G53480	PIS1, ABCG37,...	pleiotropic drug resistance 9	0.04	Archaeplastida
Cpa\|evm.model.tig00000227.8	No alias	ABC transporter G family member 31 OS=Arabidopsis thaliana	0.02	Archaeplastida
Cpa\|evm.model.tig00020537.52	No alias	ABC transporter G family member 17 OS=Arabidopsis thaliana	0.01	Archaeplastida
GSVIVT01017185001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017187001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01017196001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01017198001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
GSVIVT01031377001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
GSVIVT01033804001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Gb_05443	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Gb_30093	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Gb_41755	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os01g42350.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os02g32690.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os06g36090.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
LOC_Os09g16449.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10425791g0020	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10427683g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.04	Archaeplastida
MA_135152g0010	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Mp1g24380.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g14210.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Mp2g21800.1	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Pp3c14_11830V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Pp3c19_18700V3.1	No alias	pleiotropic drug resistance 7	0.03	Archaeplastida
Pp3c5_3340V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Smo115821	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Smo426328	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo441720	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo96758	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc05g053610.2.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc08g067620.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g019620.2.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Solyc12g019640.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g098210.3.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Solyc12g100180.2.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e003743_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e020667_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e024257_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e026148_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e027850_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e030669_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e033689_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida
Zm00001e033690_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e039353_P001	No alias	subfamily ABCG transporter	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	1254	1466
IPR013525	ABC_2_trans	563	775
IPR013581	PDR_assoc	780	847
IPR003439	ABC_transporter-like	981	1109
IPR003439	ABC_transporter-like	251	408

External Links

No external refs found!

AMTR_s00040p00185210 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation