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  5. GSVIVT01020553001

GSVIVT01020553001


Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0002581 (SeedPlants) Phylogenetic Tree(s): OG_06_0002581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020553001
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00124840 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_953274g0010 No alias No annotation 0.03 Archaeplastida
Pp3c6_26420V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 59 371
No external refs found!