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  5. GSVIVT01020595001

GSVIVT01020595001


Description : Reticulon-like protein B17 OS=Arabidopsis thaliana


Gene families : OG0003270 (Archaeplastida) Phylogenetic Tree(s): OG0003270_tree ,
OG_05_0002482 (LandPlants) Phylogenetic Tree(s): OG_05_0002482_tree ,
OG_06_0002417 (SeedPlants) Phylogenetic Tree(s): OG_06_0002417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020595001
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.13 Archaeplastida
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.1 Archaeplastida
AT2G20590 No alias Reticulon family protein 0.22 Archaeplastida
AT4G28430 No alias Reticulon family protein 0.09 Archaeplastida
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.14 Archaeplastida
LOC_Os02g19990.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c12_15930V3.1 No alias Reticulon family protein 0.04 Archaeplastida
Pp3c4_8810V3.1 No alias Reticulon family protein 0.03 Archaeplastida
Solyc07g053700.4.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.21 Archaeplastida
Zm00001e024730_P001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.15 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 82 236
No external refs found!