1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01020612001

GSVIVT01020612001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree ,
OG_06_0000058 (SeedPlants) Phylogenetic Tree(s): OG_06_0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020612001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.03 Archaeplastida
AT2G02070 IDD5, AtIDD5 indeterminate(ID)-domain 5 0.03 Archaeplastida
AT3G45260 No alias C2H2-like zinc finger protein 0.05 Archaeplastida
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.05 Archaeplastida
AT5G44160 NUC C2H2-like zinc finger protein 0.03 Archaeplastida
GSVIVT01003119001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01010283001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01016867001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01025658001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_18885 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g09850.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os01g51590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45054.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os07g39310.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
MA_10436688g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.02 Archaeplastida
Solyc03g121660.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g075250.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e000980_P002 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.1 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e027791_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034317_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e034898_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e035365_P003 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!