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  5. GSVIVT01020787001

GSVIVT01020787001


Description : Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.ArpC1 component


Gene families : OG0005498 (Archaeplastida) Phylogenetic Tree(s): OG0005498_tree ,
OG_05_0005730 (LandPlants) Phylogenetic Tree(s): OG_05_0005730_tree ,
OG_06_0006487 (SeedPlants) Phylogenetic Tree(s): OG_06_0006487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020787001
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g57220.1 No alias component ArpC1 of Arp2/3 actin polymerization initiation complex 0.03 Archaeplastida
MA_10434992g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c18_4810V3.1 No alias actin-related protein C1A 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 142 171
IPR024977 Apc4_WD40_dom 17 107
No external refs found!