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  5. GSVIVT01020827001

GSVIVT01020827001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020827001
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G42660 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.06 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020710.73 No alias No description available 0.01 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.05 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_259372g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_30710V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
CC GO:0019008 molybdopterin synthase complex IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 20 70
No external refs found!