GSVIVT01020870001


Description : Cell cycle.regulation.cyclins.CYCL-type cyclin


Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0003193 (LandPlants) Phylogenetic Tree(s): OG_05_0003193_tree ,
OG_06_0004343 (SeedPlants) Phylogenetic Tree(s): OG_06_0004343_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01020870001
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.112 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
Cpa|evm.model.tig00021433.26 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 Archaeplastida
Cre07.g321650 No alias Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 Archaeplastida
LOC_Os02g24190.2 No alias cyclin (CYCT) 0.03 Archaeplastida
LOC_Os12g30020.2 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.02 Archaeplastida
MA_101777g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g00720.1 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida
Pp3c1_13010V3.1 No alias Cyclin family protein 0.02 Archaeplastida
Pp3c2_24721V3.1 No alias Cyclin family protein 0.02 Archaeplastida
Pp3c2_24723V3.1 No alias Cyclin family protein 0.05 Archaeplastida
Zm00001e000132_P005 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.04 Archaeplastida
Zm00001e004835_P004 No alias cyclin (CYCL) 0.02 Archaeplastida
Zm00001e023107_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033489_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e033879_P003 No alias cyclin (CYCT). regulatory component of CTDK-I... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016255 attachment of GPI anchor to protein IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
CC GO:0033588 Elongator holoenzyme complex IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 11 147
No external refs found!