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  5. AMTR_s00040p00206830

AMTR_s00040p00206830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.216

Description : Cellular respiration.tricarboxylic acid cycle.isocitrate dehydrogenase dimer.regulatory component


Gene families : OG0003055 (Archaeplastida) Phylogenetic Tree(s): OG0003055_tree ,
OG_05_0002642 (LandPlants) Phylogenetic Tree(s): OG_05_0002642_tree ,
OG_06_0002516 (SeedPlants) Phylogenetic Tree(s): OG_06_0002516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00206830
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT4G35260 IDH-I, IDH1 isocitrate dehydrogenase 1 0.05 Archaeplastida
Cre17.g728800 No alias Cellular respiration.tricarboxylic acid cycle.isocitrate... 0.02 Archaeplastida
LOC_Os02g38200.1 No alias regulatory component of isocitrate dehydrogenase heterodimer 0.05 Archaeplastida
Mp1g01980.1 No alias regulatory component of isocitrate dehydrogenase heterodimer 0.07 Archaeplastida
Pp3c8_18310V3.1 No alias isocitrate dehydrogenase 1 0.03 Archaeplastida
Smo231507 No alias Cellular respiration.tricarboxylic acid cycle.isocitrate... 0.05 Archaeplastida
Solyc10g074500.2.1 No alias regulatory component of isocitrate dehydrogenase heterodimer 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 42 364
No external refs found!