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  5. GSVIVT01021032001

GSVIVT01021032001


Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0000169 (SeedPlants) Phylogenetic Tree(s): OG_06_0000169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021032001
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00011p00241810 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT2G42300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G09180 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.11 Archaeplastida
GSVIVT01011873001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
LOC_Os02g47660.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
LOC_Os03g12940.1 No alias transcription factor (bHLH). component FBX of SCF E3... 0.03 Archaeplastida
LOC_Os04g28280.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os11g25560.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Smo402301 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc06g072520.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc09g065820.4.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc10g079050.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e022005_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 273 320
No external refs found!