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Description : RNA biosynthesis.transcriptional activation.SBP transcription factor
Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01021087001 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00150040 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | Archaeplastida | |
| AMTR_s00106p00142740 | evm_27.TU.AmTr_v1... | No description available | 0.03 | Archaeplastida | |
| AT1G02065 | SPL8 | squamosa promoter binding protein-like 8 | 0.03 | Archaeplastida | |
| Cre02.g085150 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.01 | Archaeplastida | |
| Cre16.g673250 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.01 | Archaeplastida | |
| Gb_32703 | No alias | transcription factor (SBP) | 0.05 | Archaeplastida | |
| LOC_Os04g46580.1 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
| LOC_Os09g32944.1 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
| Pp3c4_6000V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.03 | Archaeplastida | |
| Pp3c6_6900V3.1 | No alias | squamosa promoter binding protein-like 8 | 0.02 | Archaeplastida | |
| Solyc07g062980.4.1 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
| Solyc10g009080.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc10g078700.3.1 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
| Zm00001e003546_P002 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
| Zm00001e010443_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
| Zm00001e013795_P002 | No alias | transcription factor (SBP) | 0.09 | Archaeplastida | |
| Zm00001e018817_P003 | No alias | transcription factor (SBP) | 0.04 | Archaeplastida | |
| Zm00001e025110_P001 | No alias | transcription factor (SBP) | 0.06 | Archaeplastida | |
| Zm00001e025234_P001 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
| Zm00001e030416_P001 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
| Zm00001e034537_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida | |
| Zm00001e034628_P001 | No alias | transcription factor (SBP) | 0.03 | Archaeplastida | |
| Zm00001e041526_P001 | No alias | transcription factor (SBP) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| MF | GO:0051287 | NAD binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004333 | SBP_dom | 56 | 129 |
| No external refs found! |