GSVIVT01021159001

Description : Solute transport.channels.GLR ligand-gated cation channel

Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0016587 (LandPlants) Phylogenetic Tree(s): OG_05_0016587_tree ,
OG_06_0016199 (SeedPlants) Phylogenetic Tree(s): OG_06_0016199_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021159001
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00178550	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
AMTR_s00021p00176450	evm_27.TU.AmTr_v1...	Solute transport.channels.GLR ligand-gated cation channel	0.03	Archaeplastida
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.05	Archaeplastida
GSVIVT01014244001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01030602001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.04	Archaeplastida
GSVIVT01033129001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.02	Archaeplastida
GSVIVT01033142001	No alias	Solute transport.channels.GLR ligand-gated cation channel	0.06	Archaeplastida
Gb_26917	No alias	ligand-gated cation channel (GLR)	0.06	Archaeplastida
LOC_Os02g54640.1	No alias	ligand-gated cation channel (GLR)	0.03	Archaeplastida
LOC_Os06g08930.1	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
LOC_Os07g01310.1	No alias	ligand-gated cation channel (GLR)	0.05	Archaeplastida
MA_7310191g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
Solyc06g063200.2.1	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida
Zm00001e009847_P001	No alias	ligand-gated cation channel (GLR)	0.04	Archaeplastida
Zm00001e016082_P001	No alias	ligand-gated cation channel (GLR)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001320	Iontro_rcpt	1183	1210
IPR001320	Iontro_rcpt	38	256
IPR001638	Solute-binding_3/MltF_N	865	1182
IPR001828	ANF_lig-bd_rcpt	440	768

External Links

No external refs found!