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  5. GSVIVT01021167001

GSVIVT01021167001


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021167001
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT1G30210 ATTCP24, TCP24 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 0.04 Archaeplastida
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
GSVIVT01011962001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
Gb_36354 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os03g49880.1 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_37369g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_4774g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc02g089830.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 66 151
No external refs found!