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  5. GSVIVT01021212001

GSVIVT01021212001


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021212001
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00087770 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.05 Archaeplastida
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.05 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.02 Archaeplastida
Gb_20867 No alias Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_23561 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os01g15900.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g48570.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os10g35300.2 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_18267g0010 No alias transcription factor (DOF) 0.05 Archaeplastida
MA_46520g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Smo29617 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc05g007880.4.1 No alias Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc08g082910.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e003086_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e038479_P002 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 60 115
No external refs found!