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  5. GSVIVT01021225001

GSVIVT01021225001


Description : Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0091671 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021225001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00048p00125480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT2G06020 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.05 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.05 Archaeplastida
Cpa|evm.model.tig00020710.73 No alias No description available 0.01 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01012707001 No alias No description available 0.04 Archaeplastida
GSVIVT01015900001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_17469 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os05g40960.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_6050V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c7_20870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc05g051060.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.07 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Zm00001e011962_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e014339_P001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e021698_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030689_P002 No alias G2-like GARP transcription factor 0.1 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037131_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 86 136
No external refs found!