GSVIVT01021253001

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase

Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021253001
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00189630	evm_27.TU.AmTr_v1...	Vesicle trafficking.regulation of membrane tethering and...	0.03	Archaeplastida
AT4G39990	ATRABA4B, ATGB3,...	RAB GTPase homolog A4B	0.04	Archaeplastida
Cre03.g189250	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.04	Archaeplastida
Gb_18286	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os05g01480.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os05g20050.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os05g44070.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
LOC_Os10g23100.1	No alias	A-class RAB GTPase	0.05	Archaeplastida
MA_109703g0010	No alias	A-class RAB GTPase	0.02	Archaeplastida
MA_59492g0010	No alias	A-class RAB GTPase	0.03	Archaeplastida
Mp3g12050.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
Pp3c14_15310V3.1	No alias	RAB GTPase homolog A2B	0.03	Archaeplastida
Pp3c2_10280V3.1	No alias	RAB GTPase homolog A2B	0.03	Archaeplastida
Smo145965	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	Archaeplastida
Smo146310	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.03	Archaeplastida
Solyc10g045550.2.1	No alias	A-class RAB GTPase	0.03	Archaeplastida
Solyc11g010100.2.1	No alias	A-class RAB GTPase	0.06	Archaeplastida
Zm00001e000673_P001	No alias	A-class RAB GTPase	0.02	Archaeplastida
Zm00001e031368_P002	No alias	A-class RAB GTPase	0.04	Archaeplastida
Zm00001e038828_P001	No alias	A-class RAB GTPase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004358	glutamate N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006525	arginine metabolic process	IEP	Neighborhood
BP	GO:0006526	arginine biosynthetic process	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Neighborhood
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015689	molybdate ion transport	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	138

External Links

No external refs found!

GSVIVT01021253001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation