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  5. AMTR_s00040p00219870

AMTR_s00040p00219870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.244

Description : DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana


Gene families : OG0006468 (Archaeplastida) Phylogenetic Tree(s): OG0006468_tree ,
OG_05_0004455 (LandPlants) Phylogenetic Tree(s): OG_05_0004455_tree ,
OG_06_0002866 (SeedPlants) Phylogenetic Tree(s): OG_06_0002866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00219870
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00219000 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00040p00219190 evm_27.TU.AmTr_v1... DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa... 0.04 Archaeplastida
AMTR_s00040p00220310 evm_27.TU.AmTr_v1... DNA (cytosine-5)-methyltransferase 2 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022702 Cytosine_MeTrfase1_RFD 755 878
IPR022702 Cytosine_MeTrfase1_RFD 109 233
IPR022702 Cytosine_MeTrfase1_RFD 408 531
No external refs found!