1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01021353001

GSVIVT01021353001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0000185 (LandPlants) Phylogenetic Tree(s): OG_05_0000185_tree ,
OG_06_0000094 (SeedPlants) Phylogenetic Tree(s): OG_06_0000094_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021353001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00254520 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.01 Archaeplastida
AMTR_s00033p00194820 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
AT3G19010 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.01 Archaeplastida
AT5G20550 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.01 Archaeplastida
GSVIVT01021328001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01021330001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021339001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031815001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.01 Archaeplastida
GSVIVT01031818001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.01 Archaeplastida
GSVIVT01031820001 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.02 Archaeplastida
LOC_Os02g21550.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g42130.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
LOC_Os06g08060.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g15149.1 No alias Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g41020.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.01 Archaeplastida
LOC_Os11g25060.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Mp2g04420.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.05 Archaeplastida
Mp2g23460.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.03 Archaeplastida
Mp3g01290.1 No alias Gibberellin 20 oxidase 1-D OS=Triticum aestivum... 0.02 Archaeplastida
Mp3g11090.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.01 Archaeplastida
Mp3g19390.1 No alias Flavanone 3-dioxygenase OS=Petroselinum crispum... 0.02 Archaeplastida
Mp3g19700.1 No alias Probable 2-oxoglutarate-dependent dioxygenase At5g05600... 0.01 Archaeplastida
Mp7g19170.1 No alias Protein DMR6-LIKE OXYGENASE 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c25_4690V3.1 No alias gibberellin 20-oxidase 3 0.01 Archaeplastida
Solyc02g071430.3.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc10g076670.3.1 No alias Probable 2-oxoglutarate-dependent dioxygenase JRG21... 0.02 Archaeplastida
Zm00001e001718_P001 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Zm00001e002816_P002 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 337 433
IPR026992 DIOX_N 181 278
No external refs found!