AMTR_s00040p00221190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.252

No description available


Gene families : OG0006468 (Archaeplastida) Phylogenetic Tree(s): OG0006468_tree ,
OG_05_0004455 (LandPlants) Phylogenetic Tree(s): OG_05_0004455_tree ,
OG_06_0002866 (SeedPlants) Phylogenetic Tree(s): OG_06_0002866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00221190
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01922p00004790 evm_27.TU.AmTr_v1... DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR022702 Cytosine_MeTrfase1_RFD 33 104
No external refs found!