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  5. GSVIVT01021528001

GSVIVT01021528001


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021528001
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
AT1G68800 TCP12, BRC2 TCP domain protein 12 0.03 Archaeplastida
AT5G08070 TCP17 TCP domain protein 17 0.03 Archaeplastida
GSVIVT01008109001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os03g49880.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_12784g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_16704g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_35349g0010 No alias transcription factor (TCP) 0.04 Archaeplastida
MA_75780g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_78665g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc02g077250.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc02g089830.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g045030.2.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc08g048390.3.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e005407_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e011911_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 50 142
No external refs found!