AMTR_s00040p00224130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.261

Description : Solute transport.carrier-mediated transport.APC superfamily.AAAP family.GABA transporter (GAT-type)


Gene families : OG0001908 (Archaeplastida) Phylogenetic Tree(s): OG0001908_tree ,
OG_05_0001249 (LandPlants) Phylogenetic Tree(s): OG_05_0001249_tree ,
OG_06_0003546 (SeedPlants) Phylogenetic Tree(s): OG_06_0003546_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00224130
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01034728001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
Gb_41062 No alias gamma-aminobutyric acid transporter (GAT) 0.02 Archaeplastida
MA_9942560g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.04 Archaeplastida
Zm00001e019226_P001 No alias gamma-aminobutyric acid transporter (GAT) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008430 selenium binding IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
CC GO:0019008 molybdopterin synthase complex IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 23 428
No external refs found!