GSVIVT01021720001

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 744.3) & Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana

Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0091723 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01021720001
Cluster	HCCA: Cluster_222

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00124850	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
AMTR_s00032p00227420	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
AMTR_s00038p00162870	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
AMTR_s00038p00163720	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
AMTR_s00038p00164300	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
AT1G26410	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT1G26420	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT1G30700	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT1G30730	No alias	FAD-binding Berberine family protein	0.06	Archaeplastida
AT1G30760	No alias	FAD-binding Berberine family protein	0.05	Archaeplastida
AT1G34575	No alias	FAD-binding Berberine family protein	0.03	Archaeplastida
AT2G34790	MEE23, EDA28	FAD-binding Berberine family protein	0.03	Archaeplastida
AT4G20830	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT4G20860	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT5G44360	No alias	FAD-binding Berberine family protein	0.02	Archaeplastida
AT5G44390	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
AT5G44440	No alias	FAD-binding Berberine family protein	0.04	Archaeplastida
GSVIVT01020745001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
GSVIVT01020746001	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01021734001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Gb_03609	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Gb_21185	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Gb_21186	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
LOC_Os02g14090.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os06g35630.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
LOC_Os06g35700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os10g21690.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
MA_132990g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
MA_26891g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Mp7g02610.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc02g022850.1.1	No alias	Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc02g022860.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
Solyc02g070070.1.1	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc02g070090.1.1	No alias	Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc02g070110.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Solyc02g070160.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Solyc06g065070.1.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Solyc09g072660.4.1	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e021429_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e030681_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Zm00001e035614_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e037256_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e037261_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Zm00001e040211_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
Zm00001e042367_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e042369_P001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	516	575
IPR012951	BBE	322	379
IPR012951	BBE	762	820

External Links

No external refs found!

GSVIVT01021720001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation