GSVIVT01021980001


No description available


Gene families : OG0000255 (Archaeplastida) Phylogenetic Tree(s): OG0000255_tree ,
OG_05_0002826 (LandPlants) Phylogenetic Tree(s): OG_05_0002826_tree ,
OG_06_0002013 (SeedPlants) Phylogenetic Tree(s): OG_06_0002013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01021980001
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00152320 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G04980 No alias DNAJ heat shock N-terminal domain-containing protein 0.05 Archaeplastida
AT5G18750 No alias DNAJ heat shock N-terminal domain-containing protein 0.04 Archaeplastida
MA_10434613g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96489g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c3_5070V3.1 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 Archaeplastida
Solyc05g040050.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g047690.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g029220.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g007630.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025632_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025633_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e033340_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040755_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018196 peptidyl-asparagine modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR024593 DUF3444 431 529
IPR024593 DUF3444 347 427
IPR024593 DUF3444 631 782
IPR001623 DnaJ_domain 67 128
No external refs found!