GSVIVT01022137001


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0002452 (LandPlants) Phylogenetic Tree(s): OG_05_0002452_tree ,
OG_06_0002735 (SeedPlants) Phylogenetic Tree(s): OG_06_0002735_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022137001
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AT2G27030 ACAM-2, CAM5 calmodulin 5 0.05 Archaeplastida
AT3G43810 CAM7 calmodulin 7 0.04 Archaeplastida
Cpa|evm.model.tig00021435.44 No alias Calmodulin OS=Mougeotia scalaris 0.03 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
LOC_Os05g41210.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.03 Archaeplastida
MA_66144g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 101 165
IPR002048 EF_hand_dom 29 91
No external refs found!