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  5. GSVIVT01022202001

GSVIVT01022202001


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana


Gene families : OG0014370 (Archaeplastida) Phylogenetic Tree(s): OG0014370_tree ,
OG_05_0015832 (LandPlants) Phylogenetic Tree(s): OG_05_0015832_tree ,
OG_06_0014184 (SeedPlants) Phylogenetic Tree(s): OG_06_0014184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022202001
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Gb_40888 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 Archaeplastida
MA_163282g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Smo76943 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 457 580
IPR002885 Pentatricopeptide_repeat 108 156
IPR002885 Pentatricopeptide_repeat 241 285
IPR002885 Pentatricopeptide_repeat 51 77
IPR002885 Pentatricopeptide_repeat 212 240
IPR002885 Pentatricopeptide_repeat 345 373
IPR002885 Pentatricopeptide_repeat 184 208
IPR002885 Pentatricopeptide_repeat 316 338
IPR002885 Pentatricopeptide_repeat 80 106
IPR002885 Pentatricopeptide_repeat 423 452
No external refs found!