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  5. GSVIVT01022214001

GSVIVT01022214001


Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YB component


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0113620 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0091787 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022214001
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014673001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01017741001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.06 Archaeplastida
Gb_07866 No alias component NF-YB of NF-Y transcription factor complex 0.06 Archaeplastida
LOC_Os07g41580.1 No alias component NF-YB of NF-Y transcription factor complex 0.08 Archaeplastida
Solyc04g015060.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc04g054150.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g009010.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc09g074760.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 110 174
No external refs found!