GSVIVT01022283001


Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP25/POP6 | RPP20/POP7 component


Gene families : OG0000895 (Archaeplastida) Phylogenetic Tree(s): OG0000895_tree ,
OG_05_0000703 (LandPlants) Phylogenetic Tree(s): OG_05_0000703_tree ,
OG_06_0000624 (SeedPlants) Phylogenetic Tree(s): OG_06_0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022283001
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g52490.1 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 Archaeplastida
LOC_Os04g34940.1 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 Archaeplastida
Solyc09g061710.3.1 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 Archaeplastida
Zm00001e005588_P002 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 Archaeplastida
Zm00001e012088_P003 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.04 Archaeplastida
Zm00001e039020_P004 No alias component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 46 110
No external refs found!