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  5. GSVIVT01022306001

GSVIVT01022306001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002315 (SeedPlants) Phylogenetic Tree(s): OG_06_0002315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022306001
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.03 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.03 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G47610 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020934.54 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20666 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g50100.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g34470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.05 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_167410g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5170g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_73524g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8693914g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo137213 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g032060.1.1 No alias RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g033330.3.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc07g006400.3.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.04 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g073170.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 98 141
No external refs found!