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  5. GSVIVT01022415001

GSVIVT01022415001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0002540 (LandPlants) Phylogenetic Tree(s): OG_05_0002540_tree ,
OG_06_0003318 (SeedPlants) Phylogenetic Tree(s): OG_06_0003318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01022415001
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AT4G05470 No alias RNI-like superfamily protein 0.01 Archaeplastida
AT4G05475 No alias RNI-like superfamily protein 0.08 Archaeplastida
AT4G05490 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT4G08980 FBW2 F-BOX WITH WD-40 2 0.03 Archaeplastida
AT5G57900 SKIP1 SKP1 interacting partner 1 0.03 Archaeplastida
Gb_15190 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 Archaeplastida
LOC_Os02g52130.5 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
LOC_Os03g43770.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g37590.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Mp2g10300.1 No alias F-box protein SKIP1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc03g122100.3.1 No alias 3-oxoacyl-[acyl-carrier-protein] synthase II,... 0.03 Archaeplastida
Solyc08g006940.4.1 No alias F-box protein SKIP19 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g009050.3.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!